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Protein Sequences
Database
- Swiss-Prot (Sequence Database)
- PIR (Protein Identification Resource Database)
- Breast Cancer Gene Database
- EC Enzyme (Enzyme Database)
- ENTREZ (Protein and Nucleotide Database)
- G-Protein Coupled Receptor Database
- Genbank
- Genome Web
- GDB (Genome Database)
- OWL (Composite Protein Sequence Database)
- p53 database
- Protein-Disease Database
- SWISS-2DPAGE
- SYSTERS Cluster Set
- Tumor Gene Database
Sequence Analysis/Comparison
- BLAST / PSI-BLAST
- GRAIL™
- GenQuest
- ALIGN
- BCM Search Launcher
- BEAUTY
- Bioinformation Search Center
- BioSCAN
- BLOCKS WWW Server
- EMBnet-CH BLAST2
- ExPASy Molecular Biology Server
- FASTA
- Hydrophobicity Profile
- Protein Hydrophilicity/Hydrophobicity Search and Comparison Server
- GAIA
- pimaII
- PROSITE (Dictionary of protein sites and patterns)
- SBASE 5 (Annotated protein domain sequences)
- SSEARCH
- Zinfo
Multiple Sequence Alignment
Membrane Proteins
Signal Prediction
- DictyOGlyc (GlcNAc O-glycosylation sites in Dictyostelium discoideum proteins)
- NetOGlyc (mucin type GalNAc O-glycosylation sites in mammalian proteins)
- NetPicoRNA (posttranslational cleavage sites by picornaviral proteases)
- PSORT WWW Server (cellular localization)
- SignalP (signal peptide cleavage sites)
Domain Parsing
Protein Families
- Molecular Sequence Megaclassification
- Pfam (Collection of Protein Domain Families)
- ProClass Database
- Protein Families Database