SEAS: a System for SEED-based Pathway Enrichment Analysis

What is it?

SEAS is a computational tool for pathway enrichment analysis over a given set of genes in a specified organism against pathways (or subsystems) in the SEED database, a popular pathway database for bacteria. SEAS maps a given set of genes in a bacterium to genes currently covered by SEED through gene ID and/or orthology mapping, and then calculates the statistical significance of the enrichment of each relevant SEED pathway by the mapped genes.


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Please see the file called INSTALL.txt.


Please see the file called LICENSE.txt.

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